CDS
| Accession Number | TCMCG051C10556 |
| gbkey | CDS |
| Protein Id | XP_006385564.1 |
| Location | join(11088941..11089207,11089433..11089566,11089676..11089811,11089940..11089993,11090456..11090596,11090697..11090848,11090926..11091016,11091243..11091434,11091676..11091819,11091977..11092129,11092354..11092421,11092578..11092700,11092803..11092902,11092999..11093111,11093206..11093857,11093979..11094050,11094134..11094232,11094736..11094858) |
| Gene | LOC18096892 |
| GeneID | 18096892 |
| Organism | Populus trichocarpa |
Protein
| Length | 937aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA17973 |
| db_source | XM_006385502.2 |
| Definition | DNA repair protein RAD5B [Populus trichocarpa] |
EGGNOG-MAPPER Annotation
| COG_category | KL |
| Description | SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03400 [VIEW IN KEGG] |
| KEGG_ko |
ko:K15505
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0009507 [VIEW IN EMBL-EBI] GO:0009526 [VIEW IN EMBL-EBI] GO:0009536 [VIEW IN EMBL-EBI] GO:0009941 [VIEW IN EMBL-EBI] GO:0031967 [VIEW IN EMBL-EBI] GO:0031975 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044434 [VIEW IN EMBL-EBI] GO:0044435 [VIEW IN EMBL-EBI] GO:0044444 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGAGAACGCGAACAAGCACCGGGATTCGGGTCCAAACCCATGTCAGAAAAGAATTGGCTGATGAGAATGTTGCTGAAGTGGAAACCAGTGATTTCCCAGAAGAGATAGATTGGTACTTGGTTGGTGGCTCTCTTATTACCGCTTCATCAACTACTAAAGGAAGGAAATTGATGGACAATGAGATTGTCCATTTTGGTTTCTCTAGTTTTGGCTCCAAGTATCATAGACAGGGCATTATTCGATTCTCTACTAAAAGATTTGGAGAGATTGGTAGGCTTCCGATGGAGTGGGGAAAAAGTGTTGTTCCACTCGTGAGTTCTGGCAAGGTTAGAGTTCGTGGACGATGTGTAGCTGCACCAGAGAACCTTCAAATGTTGCAGGATGTTGTGTTGTATGTGAGTTTCTATGTTCACCAATCGATATTCACTGAGTTGTGTATTTCAACATGGAGGCTAGATGCTCCTCCAAACATTGATCCTACAGTTCACCCCCTTGCTACTTTGTTCAAGTTACTGGACATGAAACCATATCAGAAGGCTGAATTTAGTCCTGCAGAACTTGACTCTCGAAAGCGACCCCTCAACTATGAAGATCCAGAGGAAGATGCCGTTATGTTGCATGTAGTAAAAAGGGGATCAGGATGCCAGCAAGACCAAGAGAAGGATGAACAAGCTTTCTCTGAGTCATCTTTGAATAAACTTGTTGGTGCTGTAGATACATATGACTTGGAGGAGATGGAGCCTCCATGGACCCTAACCTGTAATTTGAAACCATATCAGAAACAAGCTCTCTATTGGATGGCTGAATCAGAGAAGGGAAATAAAGCTGAGAAAGCAGCAGAAACTCTTAATCCATGTTGGGCAGCTTATCGCATATCGGACAAGAGGGCTTCATCGCCAAGCATTTATTTAAACATATTTTCTGGGGAAGCCACTACTCAATTTCCAACTGCATCACAGATGACAAAAGGGGGAATACTAGCTGATGCAATGGGACTTGGAAAGACAGTGATGACAATTGCTCTTATACTAGCAAGACCAGGCAAAGGAAGCTCTGACTGCAAAGAAAGAGTAAACAGAATAGAAGATCCCCGCACAAATACCATGCCTAAAGCTAAGGGTGGCACTCTTATTATCTGCCCCATGGCTTTGCTAGGCCAGTGGAAGGATGAGCTTGAAACCCATTCAGAGCCAGGAAGCATTTCCATTTTTGTTCACTATGGCGGGTACAAAACAAATAACCCCAGGATTATATCTGGATATGATGTGGTCTTGACAACATATGGCGTCCTAACTGAAGCTTACAAGCATGATATGGAGAACAGCATTTTTAATAGGGTTGAGTGGCATAGGGTGGTGCTAGATGAAGCTCATACCATCAAGTCCTGGAAGACCTTAGCTGCTAAGGCTACATTTTCATTGTCGTCATATTGCAAATGGTGTCTTACTGGGACACCTATTCAGAACACCTTGGAAGATCTGTACAGCCTTCTGTGCTTCTTGCATGTTGAGCCTTGGTGCAACTGGCCATGGTGGAACAAATTAATTCAAAGACCGCATGAAAATGGAGACCCTAGAGCCTTGAAGTTGATCAAGGCTATTTTGAGGCCGCTAATGTTGAGAAGGACCAAGGATACAAAGGATAAGGAGGGAAGGCCCATACTTTTTCTTCCTCCAACTGACATTCAAATAATCAAGTGTGAACAATCGGAAGCTGAACGTGATTTTTATGATGCCCTTTTTAGAAGATCAAAAGTCCAGTTTGATGAGTTTGTTGCTCAGGGCAAGGTTCTGCACAACTATGCATCTGTCCTTGAGCTGCTACTACGACTGAGGCAGTGTTGCAACCACCCATTTCTTGTTATGAGTCGAGCTGATATCCAACGATATGAGGAATTGAACAAGTATGCAAGAAGGTTTGTGGAAACAAATTCTAATTTTTCCACTCCAAGGCAGTCAGCTGCCACCGAAGCATGCATTGAAGAGGTTGTTGAGGCCATCCGCCATGCTAGTTCTGCCACCATAAGGCAATCAGCACCTACTCCAGCATACATTGAAGAGGTTGTTGAGGGCATCCGGAGGGGTGAAAATACCGAGTGTCCCATATGCATGGAGTCTGCAGATGACCCCGTGCTCACACCATGTGTACATAGGATGTGCAGGGAATGTCTCATCTCTTGCTGGCAAACACCAATATCAGGGATATGCCCGATCTGTCGAACTTCACTGAAAGCAAATGACCTGATAGCATGCCCAACAGAGGGTAAGTTCCAGGTTGATGTTGAGAATGACTGGAAGGAGTCTTCAAAGGTTTCCAAGCTTCTGGAATGCTTGGAACATATCCATAGGTCAGGCTTTGGTGAAAAGAGCATTGTTTTTAGCCAGTGGACTTCATTTTTGGATCTTTTAGAGATCCCACTGAAAAGGAGAGGAATTGGGTTCTTAAGGTTTGATGGAAAACTTGCACAGAAGCAGAGAGAGAGGACTTTGAAGGAGTTCAATGAAACCAGGGAAAAAATGGTATTATTGATGTCTTTAAAAGCTGGTGGCGTAGGCCTGAATCTTACTGCAGCCTCAAATGTTTTCTTAATGGATCCATGGTGGAATCCTGCAGTCGAGGAGCAAGCAATAATGAGAATCCATCGGATAGGACAGAAGCGAACAGTTTTTGTTAGAAGATTCATTGTTGAGAGCACAGTTGAGGAACGCCTGCAGCAAGTTCAGGCAAAGAAGCAGAGAATGATTGCCGGTGCCCTCACCGACGAGGAAGTCAGGTCCGCTAGGATTGAGGAACTCAAAATGCTCTTTAGATAA |
| Protein: MRTRTSTGIRVQTHVRKELADENVAEVETSDFPEEIDWYLVGGSLITASSTTKGRKLMDNEIVHFGFSSFGSKYHRQGIIRFSTKRFGEIGRLPMEWGKSVVPLVSSGKVRVRGRCVAAPENLQMLQDVVLYVSFYVHQSIFTELCISTWRLDAPPNIDPTVHPLATLFKLLDMKPYQKAEFSPAELDSRKRPLNYEDPEEDAVMLHVVKRGSGCQQDQEKDEQAFSESSLNKLVGAVDTYDLEEMEPPWTLTCNLKPYQKQALYWMAESEKGNKAEKAAETLNPCWAAYRISDKRASSPSIYLNIFSGEATTQFPTASQMTKGGILADAMGLGKTVMTIALILARPGKGSSDCKERVNRIEDPRTNTMPKAKGGTLIICPMALLGQWKDELETHSEPGSISIFVHYGGYKTNNPRIISGYDVVLTTYGVLTEAYKHDMENSIFNRVEWHRVVLDEAHTIKSWKTLAAKATFSLSSYCKWCLTGTPIQNTLEDLYSLLCFLHVEPWCNWPWWNKLIQRPHENGDPRALKLIKAILRPLMLRRTKDTKDKEGRPILFLPPTDIQIIKCEQSEAERDFYDALFRRSKVQFDEFVAQGKVLHNYASVLELLLRLRQCCNHPFLVMSRADIQRYEELNKYARRFVETNSNFSTPRQSAATEACIEEVVEAIRHASSATIRQSAPTPAYIEEVVEGIRRGENTECPICMESADDPVLTPCVHRMCRECLISCWQTPISGICPICRTSLKANDLIACPTEGKFQVDVENDWKESSKVSKLLECLEHIHRSGFGEKSIVFSQWTSFLDLLEIPLKRRGIGFLRFDGKLAQKQRERTLKEFNETREKMVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVESTVEERLQQVQAKKQRMIAGALTDEEVRSARIEELKMLFR |